Blueberry Lemon Cream Cheese Muffin Recipe

This post may contain affiliate links. Read my disclosure policy.

I have a hard time sleeping and this weekend was no different. I was up every morning by 5:00. I am a morning person and like to get things done, but sometimes on weekends I wish I could sleep in a little. Oh well, being up at the crack of dawn resulted in a glorious batch of blueberry cream cheese muffins.

Blueberry muffins are always popular, but I wanted to kick things up a notch. These muffins are extra special because they have a surprise inside-cream cheese!

Blueberry Lemon Cream Cheese Muffin Recipe on

I filled each muffin cup with a little batter and then I added the secret lemon cream cheese filling. I topped the muffins off with additional batter and turbinado sugar. The muffins are great on their own, but the lemon cream cheese filling with the plump, juicy blueberries makes these muffins marvelous.

Blueberry Lemon Cream Cheese Muffins on

When Josh woke up the muffins were done baking and ready to be tested. He didn’t taste the cream cheese filing until the second bite. I knew he did, because mmmm, went to MMMMM! He loved the surprise filling. It reminded him of creamy blueberry cheesecake.

Blueberry Lemon Cream Cheese Muffins on Love the surprise cream cheese filling!

A fresh blueberry muffin with lemon cheesecake in the mix is the perfect way to start any  morning! Surprise your loved ones with these muffins-they will love them!

If you live in Utah, don’t forget to come out and support the National Food Bloggers Bake Sale on Saturday, April 17th. Come taste treats from your favorite Utah bloggers and support Share Our Strength. Details can be found here.

Email Yourself This Recipe
Just enter your email and get it sent to your inbox! Plus, you’ll get NEW recipes from us every week!

Blueberry Lemon Cream Cheese Muffins

4 from 7 votes


  • 1 1/2 cups all-purpose flour
  • 1/2 teaspoon salt
  • 2 teaspoons baking powder
  • 1/4 teaspoon cinnamon
  • 1/2 cup sugar
  • Zest of 1 large lemon
  • 1/4 cup canola oil
  • 1 large egg
  • 1/3 cup skim milk
  • 1 teaspoon vanilla extract
  • 1 cup blueberries fresh or frozen
  • Cream cheese filling:
  • 3 tablespoons cream cheese
  • 1 teaspoon lemon zest
  • 1 tablespoon sugar
  • Turbinado sugar-for sprinkling on muffins before baking


  • 1. Preheat oven to 400 degrees. Grease muffin pan or line pan with muffin liners. Set aside.
  • 2. In a medium bowl, whisk together the flour, salt, baking powder, and cinnamon.
  • 3. In a small bowl, add the sugar and lemon zest. Rub sugar and zest together, until fragrant. Add to the flour mixture and whisk again.
  • 4. In a separate medium bowl, mix canola oil, egg, milk, and vanilla together.
  • 5. Incorporate the wet ingredients into flour mixture. Add slowly and do not over mix. The batter will be lumpy and thick. Gently fold in the blueberries.
  • 6. In a small bowl, mix together the cream cheese, lemon zest, and sugar until smooth. Fill each muffin cup half way with batter. Next, add about 1 teaspoon of cream cheese filling to each muffin cup. Cover each cup with remaining batter so you can't see the cream cheese filling. Sprinkle each muffin with turbinado sugar.
  • 7. Bake muffins for 17-20 minutes, or until muffins are golden brown and a toothpick comes out clean. Let muffins cool on a cooking rack.

Have you tried this recipe?

Leave a comment below and share a photo on Instagram. Tag @twopeasandpod and hashtag it with #twopeasandtheirpod

If you like these muffins, you might also like:

Oatmeal Berry Muffins from Two Peas and Their Pod
Rhubarb Apple Cinnamon Muffins from Two Peas and Their Pod
Plum Coffee Cake Muffins from Two Peas and Their Pod
Strawberry, Almond, and Coconut Muffins from Food Blogga
Apple Cinnamon Chip Muffins from My Baking Addiction
Lemon Ginger Muffins from Simply Recipes

Get the best of the best!
4 Recipes Guaranteed to be New Favorites


I'm Maria and my husband is Josh. We share a love of cooking, baking, and entertaining. We enjoy creating recipes that are simple, fresh, and family friendly. We love sitting around the table with good food, good conversation, and good friends and family! Our kitchen is always open!
Read More


Leave a Reply

Your email address will not be published. Required fields are marked *

Recipe Rating


Leave a comment

  1. Made this just a few minutes ago and they’re baking now in the oven.
    Found that the cream cheese filling just wasnt enough to stretch out for 12 muffins so I had to make more of it.
    Cant post how they taste just yet…but they sure smell great.

  2. These are my new favorite blueberry muffin recipe. Absolutely scrumptious – thanks for sharing! A friend recommended this recipe after I shared your orange almond scone recipe, which is also delicious! Thank you for a beautiful blog.

  3. I just made these and they were SO amazing! They were a lot of fun to make and everyone loves them! I’m absolutely making these again!

    1. We store them on the counter, but they don’t last long. If you are going to keep them for more than a day, I would put them in the fridge. Let them come to room temperature before serving. Enjoy!

  4. I made these delicious muffins this morning. My husband does not like fruity muffins but ate two! I loved the lemon/cream cheese addition. Thanks for another great recipe.

  5. My daughter’s favorite muffin! I have a jumbo muffin pan i haven’t used yet. What do u think about doubling the recipe for that? Any idea how long to bake?

    1. That should be fine. I would set the timer for 3 additional minutes and check them…it might need longer, but better safe than sorry:)

  6. 1 star
    I think the first reason for such a low review is that it makes 9 muffins. Most muffin tins are in some multiple of 6 so it’s just annoying that it makes 9. The recipe is not clear on exactly how full you should fill each muffin cup. And the batter is so thick and so small, that it is easy to over mix while trying to incorporate all of the liquid. 

  7. I have made this delicious recipe several times, and friends just rave about them! The original one I saw on here, listed servings as 9. I just remember that odd number, and that is exactly how many it will make. Enjoy!

  8. 5 stars
    My boys love these. Take a bit of time to prepare but well worth it. I squeeze a little more lemon juice in the batter. Give it a try. This is my go to recipe.

  9. We absolutely love your blog and find nearly all of your post’s to be exactly what I’m looking for. Do you offer guest writers to write content for you personally? I wouldn’t mind producing a post or elaborating on a number of the subjects you write regarding here. Again, awesome website!

  10. 4 stars
    Hello it’s me, I am also visiting this web page
    daily, this web site is in fact nice and the people are truly sharing
    good thoughts.

  11. Today, while I was at work, my cousin stole my iPad and tested to see if it can survive a 25 foot drop, just so she can be a youtube sensation. My iPad is now broken and she has 83 views. I know this is totally off topic but I had to share it with someone!

  12. The other day, while I was at work, my sister stole my apple ipad and tested to see if it can survive a 40 foot drop, just so she can be a youtube sensation. My apple ipad is now destroyed and she has 83 views. I know this is totally off topic but I had to share it with someone!

See More Comments